PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_021392-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 518aa    MW: 58186.7 Da    PI: 4.8309
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_021392-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.82.2e-14315361354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    ++h + Er+RR+++N++f  Lr l+P++     +K + a+i+  A++YIk+L
  NNU_021392-RA 315 ANHFATERQRREQLNEKFKALRLLVPNP-----TKADRASIVGDAIDYIKEL 361
                    68**************************.....9****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.45E-16310372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.647312361IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.8E-12315361IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.99E-13316365No hitNo description
Gene3DG3DSA:4.10.280.101.1E-14316372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-13318367IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    Send to blast
MYEETQYYDP HDPQEMPGTE SVDIPSQTVT NCSGLTPLIS SLQASLRLSS SSTSEDMPDH  60
HNPSGDTSAS PVAASIGIDL QQQLGFELEH ELNNQLIQDL LHDPTPEPFK QPNWDAEEQE  120
MQDLSYQNEQ PLLQQYHQIH DQEVQYQQQQ QQIDLQHNVH CFNPPFGHPP YTTTPDLLNL  180
LQLPSCTVSS LLPNSSSISF TNSSKKRPNY QNSLDIFGEL PVADNTAVTT GFYDHPPFHL  240
NLPPQPPVFR ELFHSLPQNY SFPGSRNDSF FGGLGEREVA GGVYQDGDGR QFENPVLDFR  300
REMSCLGNGG EAKGANHFAT ERQRREQLNE KFKALRLLVP NPTKADRASI VGDAIDYIKE  360
LLRTVDELKV LVDKKRSGRR GNKKLKTENE GAGDMESSSV KPLGTVTDKE QSFNGSLRSS  420
WLQRKSKDTE VDVRIIDDEV TIKLIQRKRM NCLLFVSKTL DELQLDLLHV AGGNIGDYYS  480
FLFNTKIYEG SSVYASAIAK KLIEVVDRQY AALPPGSF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010278769.10.0PREDICTED: transcription factor bHLH91-like
TrEMBLA5BKY11e-150A5BKY1_VITVI; Putative uncharacterized protein
STRINGVIT_15s0107g00380.t011e-148(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.11e-75bHLH family protein